PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29513
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 264aa    MW: 29072.3 Da    PI: 10.1133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29513genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.47.8e-3080137359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+v+ +tY+ +Hnh+
  EMT29513  80 DSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTVLLVTYSYDHNHP 137
               99************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.9E-3170139IPR003657WRKY domain
SuperFamilySSF1182907.45E-2676139IPR003657WRKY domain
SMARTSM007744.6E-3578138IPR003657WRKY domain
PfamPF031061.8E-2580137IPR003657WRKY domain
PROSITE profilePS5081131.43380139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MSDCSTGTDS PRADSVDEQP PADAESPGGG QSKRDQPSPS SPLPPPKRSR RSVEKRVVSV  60
PIAECGERAK TNGEGPPPPD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR  120
ADPTVLLVTY SYDHNHPWPA PKTGCHPNKS SPRLVDPKPE PGTPVECQPE QGPEAPEQEQ  180
EEEHEPWRRR RRTGSASCRG RTRSSRGWAS SRSAPSCSAA GASSPWRPPR PAPDRRASLP  240
FRSRFPPFFS FPPAVVFTRS NLEV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-17801391674WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192RRRRRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3976140.0EF397614.1 Triticum aestivum cultivar Nongda 3338 WRKY13 transcription factor (WRKY13) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003569817.15e-84PREDICTED: probable WRKY transcription factor 65
TrEMBLM8C6260.0M8C626_AEGTA; Putative WRKY transcription factor 65
STRINGMLOC_69778.22e-94(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70883651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-38WRKY DNA-binding protein 65